Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Irf4Q64287 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Irf4Q64287 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Irf4Q64287 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf4Q64287 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Irf4Q64287 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.58■□□□□ 0.89
Irf4Q64287 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.58■□□□□ 0.89
Irf4Q64287 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Irf4Q64287 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Irf4Q64287 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Irf4Q64287 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf4Q64287 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf4Q64287 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf4Q64287 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf4Q64287 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf4Q64287 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf4Q64287 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Irf4Q64287 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.55■□□□□ 0.88
Irf4Q64287 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Gm9847-201ENSMUST00000052528 599 ntBASIC20.55■□□□□ 0.88
Irf4Q64287 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf4Q64287 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf4Q64287 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf4Q64287 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Irf4Q64287 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf4Q64287 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf4Q64287 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf4Q64287 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf4Q64287 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf4Q64287 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf4Q64287 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Irf4Q64287 Gm13241-201ENSMUST00000094493 780 ntBASIC20.52■□□□□ 0.88
Irf4Q64287 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf4Q64287 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.51■□□□□ 0.87
Irf4Q64287 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.51■□□□□ 0.87
Irf4Q64287 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.51■□□□□ 0.87
Irf4Q64287 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf4Q64287 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf4Q64287 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.51■□□□□ 0.87
Irf4Q64287 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.51■□□□□ 0.87
Irf4Q64287 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf4Q64287 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf4Q64287 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf4Q64287 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf4Q64287 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf4Q64287 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Irf4Q64287 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf4Q64287 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf4Q64287 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.49■□□□□ 0.87
Irf4Q64287 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Irf4Q64287 Gm12922-201ENSMUST00000120626 809 ntBASIC20.49■□□□□ 0.87
Irf4Q64287 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.49■□□□□ 0.87
Irf4Q64287 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.49■□□□□ 0.87
Irf4Q64287 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.49■□□□□ 0.87
Irf4Q64287 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.49■□□□□ 0.87
Irf4Q64287 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Irf4Q64287 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Gm21956-201ENSMUST00000179946 522 ntBASIC20.48■□□□□ 0.87
Irf4Q64287 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.48■□□□□ 0.87
Irf4Q64287 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.48■□□□□ 0.87
Irf4Q64287 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Irf4Q64287 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Irf4Q64287 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms