Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col12a1Q60847 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col12a1Q60847 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.26■□□□□ 0.99
Col12a1Q60847 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col12a1Q60847 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col12a1Q60847 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.26■□□□□ 0.99
Col12a1Q60847 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col12a1Q60847 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.25■□□□□ 0.99
Col12a1Q60847 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col12a1Q60847 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.25■□□□□ 0.99
Col12a1Q60847 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col12a1Q60847 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.24■□□□□ 0.99
Col12a1Q60847 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col12a1Q60847 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col12a1Q60847 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.24■□□□□ 0.99
Col12a1Q60847 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Col12a1Q60847 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col12a1Q60847 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col12a1Q60847 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col12a1Q60847 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col12a1Q60847 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col12a1Q60847 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Col12a1Q60847 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Col12a1Q60847 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col12a1Q60847 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col12a1Q60847 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Col12a1Q60847 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col12a1Q60847 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Col12a1Q60847 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col12a1Q60847 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col12a1Q60847 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col12a1Q60847 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Col12a1Q60847 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.21■□□□□ 0.99
Col12a1Q60847 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.21■□□□□ 0.99
Col12a1Q60847 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col12a1Q60847 Gm9870-201ENSMUST00000063874 645 ntBASIC21.21■□□□□ 0.99
Col12a1Q60847 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.21■□□□□ 0.99
Col12a1Q60847 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col12a1Q60847 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.2■□□□□ 0.98
Col12a1Q60847 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Gm43060-201ENSMUST00000200621 289 ntBASIC21.2■□□□□ 0.98
Col12a1Q60847 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col12a1Q60847 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.2■□□□□ 0.98
Col12a1Q60847 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col12a1Q60847 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col12a1Q60847 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.19■□□□□ 0.98
Col12a1Q60847 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col12a1Q60847 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col12a1Q60847 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.18■□□□□ 0.98
Col12a1Q60847 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Col12a1Q60847 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.18■□□□□ 0.98
Col12a1Q60847 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
Col12a1Q60847 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col12a1Q60847 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col12a1Q60847 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col12a1Q60847 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col12a1Q60847 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Col12a1Q60847 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.17■□□□□ 0.98
Col12a1Q60847 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col12a1Q60847 Gm10033-202ENSMUST00000211874 928 ntBASIC21.17■□□□□ 0.98
Col12a1Q60847 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col12a1Q60847 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col12a1Q60847 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col12a1Q60847 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.16■□□□□ 0.98
Col12a1Q60847 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col12a1Q60847 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.16■□□□□ 0.98
Col12a1Q60847 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col12a1Q60847 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.15■□□□□ 0.98
Col12a1Q60847 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col12a1Q60847 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col12a1Q60847 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Col12a1Q60847 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col12a1Q60847 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col12a1Q60847 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col12a1Q60847 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.15■□□□□ 0.98
Col12a1Q60847 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Col12a1Q60847 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.14■□□□□ 0.98
Col12a1Q60847 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.14■□□□□ 0.98
Col12a1Q60847 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Col12a1Q60847 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col12a1Q60847 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col12a1Q60847 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col12a1Q60847 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col12a1Q60847 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.13■□□□□ 0.97
Col12a1Q60847 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col12a1Q60847 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Col12a1Q60847 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.13■□□□□ 0.97
Col12a1Q60847 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col12a1Q60847 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col12a1Q60847 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col12a1Q60847 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms