Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Xrcc1Q60596 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Xrcc1Q60596 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Xrcc1Q60596 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Xrcc1Q60596 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Xrcc1Q60596 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrcc1Q60596 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Xrcc1Q60596 Gm7417-201ENSMUST00000192950 473 ntBASIC19.97■□□□□ 0.79
Xrcc1Q60596 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrcc1Q60596 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrcc1Q60596 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrcc1Q60596 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.97■□□□□ 0.79
Xrcc1Q60596 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.97■□□□□ 0.79
Xrcc1Q60596 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrcc1Q60596 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.95■□□□□ 0.78
Xrcc1Q60596 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.95■□□□□ 0.78
Xrcc1Q60596 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Xrcc1Q60596 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Xrcc1Q60596 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.93■□□□□ 0.78
Xrcc1Q60596 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Xrcc1Q60596 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xrcc1Q60596 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrcc1Q60596 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.91■□□□□ 0.78
Xrcc1Q60596 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.9■□□□□ 0.78
Xrcc1Q60596 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.9■□□□□ 0.78
Xrcc1Q60596 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrcc1Q60596 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Xrcc1Q60596 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Xrcc1Q60596 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrcc1Q60596 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrcc1Q60596 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.89■□□□□ 0.77
Xrcc1Q60596 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Xrcc1Q60596 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms