Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr3Q5U430 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Gm5576-201ENSMUST00000075809 1236 ntBASIC26.21■■□□□ 1.79
Ubr3Q5U430 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ubr3Q5U430 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ubr3Q5U430 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ubr3Q5U430 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ubr3Q5U430 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.2■■□□□ 1.78
Ubr3Q5U430 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
Ubr3Q5U430 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr3Q5U430 Gm10849-201ENSMUST00000100397 618 ntBASIC26.18■■□□□ 1.78
Ubr3Q5U430 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr3Q5U430 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.17■■□□□ 1.78
Ubr3Q5U430 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Ubr3Q5U430 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ubr3Q5U430 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
Ubr3Q5U430 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ubr3Q5U430 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.14■■□□□ 1.77
Ubr3Q5U430 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC26.13■■□□□ 1.77
Ubr3Q5U430 Gm43759-201ENSMUST00000196925 1261 ntBASIC26.13■■□□□ 1.77
Ubr3Q5U430 Gm10493-201ENSMUST00000097270 612 ntBASIC26.13■■□□□ 1.77
Ubr3Q5U430 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr3Q5U430 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr3Q5U430 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr3Q5U430 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr3Q5U430 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Ubr3Q5U430 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr3Q5U430 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC26.12■■□□□ 1.77
Ubr3Q5U430 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Ubr3Q5U430 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr3Q5U430 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr3Q5U430 Spcs1-204ENSMUST00000226782 949 ntBASIC26.11■■□□□ 1.77
Ubr3Q5U430 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr3Q5U430 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr3Q5U430 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr3Q5U430 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr3Q5U430 Gm27011-201ENSMUST00000182352 972 ntBASIC26.1■■□□□ 1.77
Ubr3Q5U430 Gm37179-201ENSMUST00000194862 823 ntBASIC26.09■■□□□ 1.77
Ubr3Q5U430 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC26.09■■□□□ 1.77
Ubr3Q5U430 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr3Q5U430 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.09■■□□□ 1.77
Ubr3Q5U430 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr3Q5U430 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr3Q5U430 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr3Q5U430 Gm27405-201ENSMUST00000184201 112 ntBASIC26.08■■□□□ 1.77
Ubr3Q5U430 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.08■■□□□ 1.77
Ubr3Q5U430 Spcs1-207ENSMUST00000228767 1008 ntBASIC26.08■■□□□ 1.77
Ubr3Q5U430 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ubr3Q5U430 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ubr3Q5U430 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ubr3Q5U430 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr3Q5U430 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.06■■□□□ 1.76
Ubr3Q5U430 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr3Q5U430 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.06■■□□□ 1.76
Ubr3Q5U430 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr3Q5U430 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr3Q5U430 Gm26833-201ENSMUST00000180899 440 ntBASIC26.05■■□□□ 1.76
Ubr3Q5U430 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr3Q5U430 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr3Q5U430 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ubr3Q5U430 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr3Q5U430 Gm7143-201ENSMUST00000222811 859 ntBASIC26.04■■□□□ 1.76
Ubr3Q5U430 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms