Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Urb1Q571H0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
Urb1Q571H0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Urb1Q571H0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Urb1Q571H0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.25■□□□□ 0.67
Urb1Q571H0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Urb1Q571H0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Urb1Q571H0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Urb1Q571H0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Urb1Q571H0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.24■□□□□ 0.67
Urb1Q571H0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Urb1Q571H0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.24■□□□□ 0.67
Urb1Q571H0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Urb1Q571H0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.24■□□□□ 0.67
Urb1Q571H0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.23■□□□□ 0.67
Urb1Q571H0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Urb1Q571H0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Urb1Q571H0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Urb1Q571H0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Urb1Q571H0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Urb1Q571H0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Urb1Q571H0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Urb1Q571H0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Urb1Q571H0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Urb1Q571H0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.21■□□□□ 0.67
Urb1Q571H0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.21■□□□□ 0.67
Urb1Q571H0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Urb1Q571H0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Urb1Q571H0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.2■□□□□ 0.66
Urb1Q571H0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Urb1Q571H0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.2■□□□□ 0.66
Urb1Q571H0 Gm12251-201ENSMUST00000117893 792 ntBASIC19.2■□□□□ 0.66
Urb1Q571H0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.2■□□□□ 0.66
Urb1Q571H0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Urb1Q571H0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.19■□□□□ 0.66
Urb1Q571H0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Urb1Q571H0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.19■□□□□ 0.66
Urb1Q571H0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.19■□□□□ 0.66
Urb1Q571H0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.19■□□□□ 0.66
Urb1Q571H0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Urb1Q571H0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Urb1Q571H0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Urb1Q571H0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Urb1Q571H0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Urb1Q571H0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Urb1Q571H0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Urb1Q571H0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Urb1Q571H0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Urb1Q571H0 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.18■□□□□ 0.66
Urb1Q571H0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 Gm43173-201ENSMUST00000202246 593 ntBASIC19.17■□□□□ 0.66
Urb1Q571H0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Urb1Q571H0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Urb1Q571H0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.17■□□□□ 0.66
Urb1Q571H0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Urb1Q571H0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.17■□□□□ 0.66
Urb1Q571H0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.17■□□□□ 0.66
Urb1Q571H0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Urb1Q571H0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Urb1Q571H0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.17■□□□□ 0.66
Urb1Q571H0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Urb1Q571H0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.16■□□□□ 0.66
Urb1Q571H0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Urb1Q571H0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Urb1Q571H0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Urb1Q571H0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Urb1Q571H0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.15■□□□□ 0.66
Urb1Q571H0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.15■□□□□ 0.66
Urb1Q571H0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.15■□□□□ 0.66
Urb1Q571H0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Urb1Q571H0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms