Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn2bQ56A07 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.66■□□□□ 0.9
Scn2bQ56A07 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scn2bQ56A07 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Scn2bQ56A07 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.65■□□□□ 0.9
Scn2bQ56A07 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn2bQ56A07 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scn2bQ56A07 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn2bQ56A07 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn2bQ56A07 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn2bQ56A07 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn2bQ56A07 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn2bQ56A07 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.64■□□□□ 0.89
Scn2bQ56A07 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn2bQ56A07 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Scn2bQ56A07 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Scn2bQ56A07 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn2bQ56A07 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn2bQ56A07 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn2bQ56A07 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn2bQ56A07 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Scn2bQ56A07 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.63■□□□□ 0.89
Scn2bQ56A07 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn2bQ56A07 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn2bQ56A07 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn2bQ56A07 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn2bQ56A07 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn2bQ56A07 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.61■□□□□ 0.89
Scn2bQ56A07 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn2bQ56A07 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn2bQ56A07 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn2bQ56A07 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn2bQ56A07 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scn2bQ56A07 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn2bQ56A07 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn2bQ56A07 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Scn2bQ56A07 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn2bQ56A07 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scn2bQ56A07 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn2bQ56A07 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn2bQ56A07 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn2bQ56A07 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.58■□□□□ 0.88
Scn2bQ56A07 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn2bQ56A07 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn2bQ56A07 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn2bQ56A07 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn2bQ56A07 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.56■□□□□ 0.88
Scn2bQ56A07 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn2bQ56A07 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn2bQ56A07 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn2bQ56A07 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn2bQ56A07 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn2bQ56A07 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.54■□□□□ 0.88
Scn2bQ56A07 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn2bQ56A07 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn2bQ56A07 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn2bQ56A07 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms