Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf223Q3UV31 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm21956-201ENSMUST00000179946 522 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm13241-201ENSMUST00000094493 780 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Golgb1-201ENSMUST00000023534 498 ntBASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms