Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf223Q3UV31 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.41■□□□□ 0.86
Rnf223Q3UV31 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf223Q3UV31 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf223Q3UV31 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf223Q3UV31 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm21956-201ENSMUST00000179946 522 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Gm13241-201ENSMUST00000094493 780 ntBASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf223Q3UV31 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf223Q3UV31 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf223Q3UV31 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf223Q3UV31 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf223Q3UV31 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf223Q3UV31 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rnf223Q3UV31 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Golgb1-201ENSMUST00000023534 498 ntBASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
Rnf223Q3UV31 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms