Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.42■■□□□ 1.66
Col5a2Q3U962 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.42■■□□□ 1.66
Col5a2Q3U962 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col5a2Q3U962 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col5a2Q3U962 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Col5a2Q3U962 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col5a2Q3U962 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col5a2Q3U962 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Col5a2Q3U962 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col5a2Q3U962 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col5a2Q3U962 Gm27011-201ENSMUST00000182352 972 ntBASIC25.4■■□□□ 1.66
Col5a2Q3U962 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.4■■□□□ 1.66
Col5a2Q3U962 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Col5a2Q3U962 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Col5a2Q3U962 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Col5a2Q3U962 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Col5a2Q3U962 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col5a2Q3U962 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Col5a2Q3U962 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.38■■□□□ 1.65
Col5a2Q3U962 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Col5a2Q3U962 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Col5a2Q3U962 Gm37179-201ENSMUST00000194862 823 ntBASIC25.37■■□□□ 1.65
Col5a2Q3U962 Gm10493-201ENSMUST00000097270 612 ntBASIC25.37■■□□□ 1.65
Col5a2Q3U962 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Col5a2Q3U962 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC25.36■■□□□ 1.65
Col5a2Q3U962 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.36■■□□□ 1.65
Col5a2Q3U962 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
Col5a2Q3U962 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col5a2Q3U962 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col5a2Q3U962 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col5a2Q3U962 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col5a2Q3U962 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col5a2Q3U962 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col5a2Q3U962 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col5a2Q3U962 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col5a2Q3U962 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col5a2Q3U962 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col5a2Q3U962 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col5a2Q3U962 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.33■■□□□ 1.65
Col5a2Q3U962 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col5a2Q3U962 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col5a2Q3U962 Cdc34b-202ENSMUST00000188741 1252 ntBASIC25.33■■□□□ 1.65
Col5a2Q3U962 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col5a2Q3U962 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Col5a2Q3U962 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Col5a2Q3U962 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Col5a2Q3U962 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col5a2Q3U962 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col5a2Q3U962 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Col5a2Q3U962 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col5a2Q3U962 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col5a2Q3U962 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col5a2Q3U962 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Col5a2Q3U962 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Col5a2Q3U962 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.3■■□□□ 1.64
Col5a2Q3U962 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col5a2Q3U962 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Col5a2Q3U962 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.28■■□□□ 1.64
Col5a2Q3U962 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col5a2Q3U962 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col5a2Q3U962 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col5a2Q3U962 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col5a2Q3U962 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.28■■□□□ 1.64
Col5a2Q3U962 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col5a2Q3U962 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col5a2Q3U962 AC112142.1-201ENSMUST00000228796 918 ntBASIC25.26■■□□□ 1.63
Col5a2Q3U962 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col5a2Q3U962 Gm42569-201ENSMUST00000200539 472 ntBASIC25.25■■□□□ 1.63
Col5a2Q3U962 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Col5a2Q3U962 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col5a2Q3U962 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Col5a2Q3U962 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col5a2Q3U962 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.24■■□□□ 1.63
Col5a2Q3U962 Spcs1-204ENSMUST00000226782 949 ntBASIC25.24■■□□□ 1.63
Col5a2Q3U962 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col5a2Q3U962 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms