Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.71■□□□□ 0.43
Cln6Q3U466 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cln6Q3U466 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cln6Q3U466 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cln6Q3U466 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln6Q3U466 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Cln6Q3U466 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln6Q3U466 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cln6Q3U466 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cln6Q3U466 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cln6Q3U466 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln6Q3U466 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cln6Q3U466 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cln6Q3U466 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln6Q3U466 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln6Q3U466 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln6Q3U466 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cln6Q3U466 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
Cln6Q3U466 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cln6Q3U466 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln6Q3U466 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln6Q3U466 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cln6Q3U466 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln6Q3U466 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cln6Q3U466 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cln6Q3U466 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln6Q3U466 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln6Q3U466 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.66■□□□□ 0.42
Cln6Q3U466 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Cln6Q3U466 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln6Q3U466 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.66■□□□□ 0.42
Cln6Q3U466 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln6Q3U466 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln6Q3U466 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cln6Q3U466 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln6Q3U466 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cln6Q3U466 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cln6Q3U466 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cln6Q3U466 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cln6Q3U466 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cln6Q3U466 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cln6Q3U466 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.63■□□□□ 0.41
Cln6Q3U466 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln6Q3U466 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.63■□□□□ 0.41
Cln6Q3U466 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Cln6Q3U466 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cln6Q3U466 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cln6Q3U466 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cln6Q3U466 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cln6Q3U466 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.61■□□□□ 0.41
Cln6Q3U466 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms