Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Gm45855-201ENSMUST00000212546 880 ntBASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim6Q3U0I6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smim6Q3U0I6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim6Q3U0I6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim6Q3U0I6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim6Q3U0I6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.27■□□□□ 0.2
Smim6Q3U0I6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smim6Q3U0I6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim6Q3U0I6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smim6Q3U0I6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Smim6Q3U0I6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim6Q3U0I6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim6Q3U0I6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smim6Q3U0I6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smim6Q3U0I6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim6Q3U0I6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim6Q3U0I6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smim6Q3U0I6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smim6Q3U0I6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.24■□□□□ 0.19
Smim6Q3U0I6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Gm4799-201ENSMUST00000095396 657 ntBASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim6Q3U0I6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim6Q3U0I6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim6Q3U0I6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smim6Q3U0I6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smim6Q3U0I6 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.2■□□□□ 0.18
Smim6Q3U0I6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim6Q3U0I6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim6Q3U0I6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim6Q3U0I6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms