Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shcbp1lQ3TTP0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shcbp1lQ3TTP0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shcbp1lQ3TTP0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shcbp1lQ3TTP0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Shcbp1lQ3TTP0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shcbp1lQ3TTP0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shcbp1lQ3TTP0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shcbp1lQ3TTP0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shcbp1lQ3TTP0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shcbp1lQ3TTP0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Shcbp1lQ3TTP0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shcbp1lQ3TTP0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shcbp1lQ3TTP0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shcbp1lQ3TTP0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shcbp1lQ3TTP0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shcbp1lQ3TTP0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Shcbp1lQ3TTP0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shcbp1lQ3TTP0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shcbp1lQ3TTP0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.95■□□□□ 0.94
Shcbp1lQ3TTP0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.95■□□□□ 0.94
Shcbp1lQ3TTP0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shcbp1lQ3TTP0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shcbp1lQ3TTP0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.93■□□□□ 0.94
Shcbp1lQ3TTP0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms