Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptchd3Q0EEE2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptchd3Q0EEE2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ptchd3Q0EEE2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Gm12366-201ENSMUST00000121722 873 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Gm5786-201ENSMUST00000085368 882 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptchd3Q0EEE2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptchd3Q0EEE2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptchd3Q0EEE2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptchd3Q0EEE2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptchd3Q0EEE2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptchd3Q0EEE2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptchd3Q0EEE2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptchd3Q0EEE2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptchd3Q0EEE2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptchd3Q0EEE2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ptchd3Q0EEE2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Ptchd3Q0EEE2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
Ptchd3Q0EEE2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms