Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
Smn1P97801 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Gm16437-201ENSMUST00000025669 507 ntBASIC17.87■□□□□ 0.45
Smn1P97801 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Smn1P97801 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.87■□□□□ 0.45
Smn1P97801 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smn1P97801 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smn1P97801 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.86■□□□□ 0.45
Smn1P97801 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smn1P97801 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smn1P97801 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smn1P97801 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Smn1P97801 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smn1P97801 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smn1P97801 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.85■□□□□ 0.45
Smn1P97801 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.85■□□□□ 0.45
Smn1P97801 Gm9806-201ENSMUST00000051080 552 ntBASIC17.85■□□□□ 0.45
Smn1P97801 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Smn1P97801 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Smn1P97801 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smn1P97801 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smn1P97801 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smn1P97801 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smn1P97801 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smn1P97801 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smn1P97801 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Smn1P97801 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smn1P97801 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smn1P97801 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smn1P97801 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Smn1P97801 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.83■□□□□ 0.44
Smn1P97801 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smn1P97801 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.83■□□□□ 0.44
Smn1P97801 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smn1P97801 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smn1P97801 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smn1P97801 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.82■□□□□ 0.44
Smn1P97801 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smn1P97801 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smn1P97801 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Smn1P97801 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smn1P97801 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.8■□□□□ 0.44
Smn1P97801 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smn1P97801 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smn1P97801 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Smn1P97801 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smn1P97801 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smn1P97801 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smn1P97801 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smn1P97801 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.78■□□□□ 0.44
Smn1P97801 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smn1P97801 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smn1P97801 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smn1P97801 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.77■□□□□ 0.44
Smn1P97801 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smn1P97801 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smn1P97801 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smn1P97801 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smn1P97801 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.77■□□□□ 0.43
Smn1P97801 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms