Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.63■■□□□ 1.05
Vps45P97390 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Vps45P97390 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vps45P97390 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Vps45P97390 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.62■■□□□ 1.05
Vps45P97390 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vps45P97390 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vps45P97390 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps45P97390 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps45P97390 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps45P97390 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps45P97390 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vps45P97390 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps45P97390 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps45P97390 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.6■■□□□ 1.05
Vps45P97390 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Vps45P97390 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps45P97390 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Vps45P97390 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.59■■□□□ 1.05
Vps45P97390 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.59■■□□□ 1.05
Vps45P97390 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps45P97390 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Vps45P97390 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Vps45P97390 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.58■■□□□ 1.05
Vps45P97390 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps45P97390 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps45P97390 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps45P97390 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps45P97390 Gm9847-201ENSMUST00000052528 599 ntBASIC21.58■■□□□ 1.05
Vps45P97390 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.58■■□□□ 1.04
Vps45P97390 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Vps45P97390 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps45P97390 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Vps45P97390 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.57■■□□□ 1.04
Vps45P97390 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps45P97390 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps45P97390 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps45P97390 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.57■■□□□ 1.04
Vps45P97390 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps45P97390 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.56■■□□□ 1.04
Vps45P97390 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.56■■□□□ 1.04
Vps45P97390 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vps45P97390 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps45P97390 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps45P97390 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.55■■□□□ 1.04
Vps45P97390 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps45P97390 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.55■■□□□ 1.04
Vps45P97390 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps45P97390 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.55■■□□□ 1.04
Vps45P97390 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.55■■□□□ 1.04
Vps45P97390 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps45P97390 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Vps45P97390 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps45P97390 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps45P97390 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.54■■□□□ 1.04
Vps45P97390 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps45P97390 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps45P97390 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps45P97390 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps45P97390 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps45P97390 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps45P97390 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps45P97390 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps45P97390 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps45P97390 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.52■■□□□ 1.04
Vps45P97390 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.52■■□□□ 1.04
Vps45P97390 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps45P97390 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.52■■□□□ 1.04
Vps45P97390 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps45P97390 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps45P97390 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps45P97390 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Vps45P97390 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Vps45P97390 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.51■■□□□ 1.03
Vps45P97390 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps45P97390 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps45P97390 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps45P97390 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps45P97390 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.5■■□□□ 1.03
Vps45P97390 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps45P97390 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps45P97390 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms