Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Cdh6P97326 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Cdh6P97326 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.24■□□□□ 0.99
Cdh6P97326 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.24■□□□□ 0.99
Cdh6P97326 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh6P97326 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.24■□□□□ 0.99
Cdh6P97326 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Cdh6P97326 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh6P97326 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh6P97326 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh6P97326 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.23■□□□□ 0.99
Cdh6P97326 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh6P97326 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.23■□□□□ 0.99
Cdh6P97326 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh6P97326 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdh6P97326 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh6P97326 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh6P97326 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Cdh6P97326 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh6P97326 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cdh6P97326 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdh6P97326 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh6P97326 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh6P97326 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Cdh6P97326 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh6P97326 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.21■□□□□ 0.99
Cdh6P97326 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdh6P97326 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.21■□□□□ 0.99
Cdh6P97326 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh6P97326 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdh6P97326 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh6P97326 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh6P97326 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh6P97326 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh6P97326 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh6P97326 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh6P97326 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh6P97326 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh6P97326 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdh6P97326 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh6P97326 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh6P97326 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh6P97326 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh6P97326 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh6P97326 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdh6P97326 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdh6P97326 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh6P97326 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh6P97326 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh6P97326 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh6P97326 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cdh6P97326 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh6P97326 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cdh6P97326 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cdh6P97326 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.16■□□□□ 0.98
Cdh6P97326 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh6P97326 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cdh6P97326 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh6P97326 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh6P97326 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh6P97326 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh6P97326 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Cdh6P97326 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh6P97326 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh6P97326 Gm40881-201ENSMUST00000223397 166 ntBASIC21.15■□□□□ 0.98
Cdh6P97326 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh6P97326 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh6P97326 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh6P97326 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh6P97326 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh6P97326 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh6P97326 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cdh6P97326 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.14■□□□□ 0.97
Cdh6P97326 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.14■□□□□ 0.97
Cdh6P97326 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cdh6P97326 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh6P97326 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh6P97326 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh6P97326 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cdh6P97326 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh6P97326 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Cdh6P97326 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh6P97326 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh6P97326 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.12■□□□□ 0.97
Cdh6P97326 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cdh6P97326 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.12■□□□□ 0.97
Cdh6P97326 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh6P97326 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh6P97326 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms