Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SgcbP82349 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SgcbP82349 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.64■□□□□ 0.57
SgcbP82349 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.64■□□□□ 0.57
SgcbP82349 Gm45102-201ENSMUST00000207427 857 ntBASIC18.64■□□□□ 0.57
SgcbP82349 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.64■□□□□ 0.57
SgcbP82349 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SgcbP82349 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcbP82349 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcbP82349 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcbP82349 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.63■□□□□ 0.57
SgcbP82349 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SgcbP82349 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.63■□□□□ 0.57
SgcbP82349 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.63■□□□□ 0.57
SgcbP82349 Gm40881-201ENSMUST00000223397 166 ntBASIC18.63■□□□□ 0.57
SgcbP82349 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcbP82349 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcbP82349 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.62■□□□□ 0.57
SgcbP82349 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.62■□□□□ 0.57
SgcbP82349 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SgcbP82349 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcbP82349 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcbP82349 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SgcbP82349 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SgcbP82349 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SgcbP82349 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcbP82349 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcbP82349 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcbP82349 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcbP82349 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SgcbP82349 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SgcbP82349 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcbP82349 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcbP82349 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.6■□□□□ 0.57
SgcbP82349 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.6■□□□□ 0.57
SgcbP82349 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcbP82349 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcbP82349 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcbP82349 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SgcbP82349 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcbP82349 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcbP82349 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.59■□□□□ 0.57
SgcbP82349 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SgcbP82349 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.59■□□□□ 0.57
SgcbP82349 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.59■□□□□ 0.57
SgcbP82349 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SgcbP82349 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.59■□□□□ 0.57
SgcbP82349 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.59■□□□□ 0.57
SgcbP82349 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.59■□□□□ 0.57
SgcbP82349 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcbP82349 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcbP82349 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SgcbP82349 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SgcbP82349 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcbP82349 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SgcbP82349 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SgcbP82349 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcbP82349 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcbP82349 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SgcbP82349 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.57■□□□□ 0.56
SgcbP82349 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcbP82349 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcbP82349 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcbP82349 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SgcbP82349 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.56■□□□□ 0.56
SgcbP82349 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.56■□□□□ 0.56
SgcbP82349 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcbP82349 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcbP82349 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.56■□□□□ 0.56
SgcbP82349 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcbP82349 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcbP82349 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SgcbP82349 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.53■□□□□ 0.56
SgcbP82349 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.53■□□□□ 0.56
SgcbP82349 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms