Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rps28P62858 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rps28P62858 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rps28P62858 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rps28P62858 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rps28P62858 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.54□□□□□ -0.4
Rps28P62858 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rps28P62858 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rps28P62858 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.53□□□□□ -0.4
Rps28P62858 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.53□□□□□ -0.4
Rps28P62858 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rps28P62858 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC12.53□□□□□ -0.4
Rps28P62858 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rps28P62858 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rps28P62858 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.52□□□□□ -0.4
Rps28P62858 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rps28P62858 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rps28P62858 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rps28P62858 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rps28P62858 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC12.52□□□□□ -0.41
Rps28P62858 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rps28P62858 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rps28P62858 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rps28P62858 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Rps28P62858 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rps28P62858 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rps28P62858 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rps28P62858 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rps28P62858 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rps28P62858 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rps28P62858 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rps28P62858 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rps28P62858 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rps28P62858 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rps28P62858 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rps28P62858 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rps28P62858 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rps28P62858 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rps28P62858 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC12.48□□□□□ -0.41
Rps28P62858 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rps28P62858 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.47□□□□□ -0.41
Rps28P62858 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.47□□□□□ -0.41
Rps28P62858 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rps28P62858 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rps28P62858 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms