Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne2P59108 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne2P59108 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne2P59108 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cpne2P59108 Scarna2-201ENSMUST00000157560 414 ntBASIC17.46■□□□□ 0.39
Cpne2P59108 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.46■□□□□ 0.39
Cpne2P59108 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cpne2P59108 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne2P59108 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne2P59108 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.45■□□□□ 0.38
Cpne2P59108 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Gm9806-201ENSMUST00000051080 552 ntBASIC17.45■□□□□ 0.38
Cpne2P59108 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne2P59108 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Cpne2P59108 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne2P59108 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.44■□□□□ 0.38
Cpne2P59108 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cpne2P59108 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne2P59108 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne2P59108 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne2P59108 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cpne2P59108 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cpne2P59108 Gm44428-201ENSMUST00000204474 874 ntBASIC17.43■□□□□ 0.38
Cpne2P59108 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne2P59108 Gm16437-201ENSMUST00000025669 507 ntBASIC17.43■□□□□ 0.38
Cpne2P59108 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne2P59108 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne2P59108 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cpne2P59108 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne2P59108 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne2P59108 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne2P59108 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne2P59108 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Cpne2P59108 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cpne2P59108 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cpne2P59108 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne2P59108 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.41■□□□□ 0.38
Cpne2P59108 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cpne2P59108 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpne2P59108 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Gm11687-201ENSMUST00000118911 886 ntBASIC17.4■□□□□ 0.38
Cpne2P59108 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne2P59108 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Cpne2P59108 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpne2P59108 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne2P59108 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne2P59108 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne2P59108 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne2P59108 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne2P59108 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cpne2P59108 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cpne2P59108 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne2P59108 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne2P59108 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne2P59108 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpne2P59108 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpne2P59108 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cpne2P59108 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne2P59108 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cpne2P59108 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne2P59108 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Cpne2P59108 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cpne2P59108 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.36■□□□□ 0.37
Cpne2P59108 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpne2P59108 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne2P59108 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms