Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkn2bP55271 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.07■□□□□ 0.8
Cdkn2bP55271 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cdkn2bP55271 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkn2bP55271 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.07■□□□□ 0.8
Cdkn2bP55271 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.07■□□□□ 0.8
Cdkn2bP55271 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkn2bP55271 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn2bP55271 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Gm27502-201ENSMUST00000183495 199 ntBASIC20.05■□□□□ 0.8
Cdkn2bP55271 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.05■□□□□ 0.8
Cdkn2bP55271 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn2bP55271 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkn2bP55271 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cdkn2bP55271 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Gm14523-201ENSMUST00000117260 558 ntBASIC20.03■□□□□ 0.8
Cdkn2bP55271 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn2bP55271 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cdkn2bP55271 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cdkn2bP55271 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn2bP55271 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Cdkn2bP55271 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn2bP55271 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdkn2bP55271 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdkn2bP55271 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdkn2bP55271 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkn2bP55271 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn2bP55271 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdkn2bP55271 Gm7332-201ENSMUST00000118351 454 ntBASIC19.96■□□□□ 0.79
Cdkn2bP55271 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.96■□□□□ 0.79
Cdkn2bP55271 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms