Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox1P53783 Mir7071-201ENSMUST00000184847 69 ntBASIC21.73■■□□□ 1.07
Sox1P53783 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox1P53783 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.73■■□□□ 1.07
Sox1P53783 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.73■■□□□ 1.07
Sox1P53783 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox1P53783 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox1P53783 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.73■■□□□ 1.07
Sox1P53783 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox1P53783 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Sox1P53783 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Sox1P53783 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.71■■□□□ 1.07
Sox1P53783 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Sox1P53783 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Sox1P53783 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox1P53783 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox1P53783 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox1P53783 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox1P53783 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.71■■□□□ 1.07
Sox1P53783 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Sox1P53783 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox1P53783 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sox1P53783 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.7■■□□□ 1.06
Sox1P53783 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sox1P53783 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sox1P53783 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.69■■□□□ 1.06
Sox1P53783 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.69■■□□□ 1.06
Sox1P53783 Gm10653-202ENSMUST00000139570 835 ntBASIC21.69■■□□□ 1.06
Sox1P53783 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.69■■□□□ 1.06
Sox1P53783 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox1P53783 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sox1P53783 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Sox1P53783 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.69■■□□□ 1.06
Sox1P53783 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.68■■□□□ 1.06
Sox1P53783 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sox1P53783 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox1P53783 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox1P53783 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.67■■□□□ 1.06
Sox1P53783 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sox1P53783 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.67■■□□□ 1.06
Sox1P53783 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.67■■□□□ 1.06
Sox1P53783 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.67■■□□□ 1.06
Sox1P53783 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox1P53783 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
Sox1P53783 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox1P53783 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.66■■□□□ 1.06
Sox1P53783 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox1P53783 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox1P53783 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox1P53783 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sox1P53783 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox1P53783 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox1P53783 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox1P53783 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox1P53783 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox1P53783 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sox1P53783 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.63■■□□□ 1.05
Sox1P53783 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox1P53783 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox1P53783 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.62■■□□□ 1.05
Sox1P53783 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.62■■□□□ 1.05
Sox1P53783 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox1P53783 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Sox1P53783 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.62■■□□□ 1.05
Sox1P53783 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.62■■□□□ 1.05
Sox1P53783 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox1P53783 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox1P53783 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sox1P53783 Gm27801-201ENSMUST00000184174 223 ntBASIC21.61■■□□□ 1.05
Sox1P53783 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox1P53783 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox1P53783 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Sox1P53783 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.6■■□□□ 1.05
Sox1P53783 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.6■■□□□ 1.05
Sox1P53783 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox1P53783 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox1P53783 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.6■■□□□ 1.05
Sox1P53783 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox1P53783 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox1P53783 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.59■■□□□ 1.05
Sox1P53783 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Sox1P53783 Gm12933-201ENSMUST00000120203 872 ntBASIC21.59■■□□□ 1.05
Sox1P53783 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.59■■□□□ 1.05
Sox1P53783 Gm7977-201ENSMUST00000193787 748 ntBASIC21.59■■□□□ 1.05
Sox1P53783 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.59■■□□□ 1.05
Sox1P53783 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Sox1P53783 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox1P53783 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sox1P53783 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.58■■□□□ 1.05
Sox1P53783 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox1P53783 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox1P53783 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox1P53783 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms