Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Limk1P53668 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.52■□□□□ 0.88
Limk1P53668 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Limk1P53668 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Limk1P53668 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Limk1P53668 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.52■□□□□ 0.88
Limk1P53668 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
Limk1P53668 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.52■□□□□ 0.87
Limk1P53668 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Limk1P53668 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Limk1P53668 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Limk1P53668 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Limk1P53668 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Limk1P53668 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.5■□□□□ 0.87
Limk1P53668 Gm43017-201ENSMUST00000198296 752 ntBASIC20.5■□□□□ 0.87
Limk1P53668 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Limk1P53668 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Limk1P53668 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Limk1P53668 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.49■□□□□ 0.87
Limk1P53668 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Limk1P53668 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Limk1P53668 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Limk1P53668 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.48■□□□□ 0.87
Limk1P53668 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
Limk1P53668 Mir7075-201ENSMUST00000184187 82 ntBASIC20.48■□□□□ 0.87
Limk1P53668 Gm7291-201ENSMUST00000199147 382 ntBASIC20.48■□□□□ 0.87
Limk1P53668 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Limk1P53668 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Limk1P53668 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Limk1P53668 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Limk1P53668 Gm43137-201ENSMUST00000198052 594 ntBASIC20.47■□□□□ 0.87
Limk1P53668 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.47■□□□□ 0.87
Limk1P53668 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Limk1P53668 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.47■□□□□ 0.87
Limk1P53668 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Limk1P53668 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Limk1P53668 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Limk1P53668 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Limk1P53668 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Limk1P53668 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Limk1P53668 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Limk1P53668 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Limk1P53668 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
Limk1P53668 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Limk1P53668 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Limk1P53668 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Limk1P53668 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Limk1P53668 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Limk1P53668 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Limk1P53668 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.44■□□□□ 0.86
Limk1P53668 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Limk1P53668 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Limk1P53668 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Limk1P53668 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Limk1P53668 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.43■□□□□ 0.86
Limk1P53668 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.43■□□□□ 0.86
Limk1P53668 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Limk1P53668 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Limk1P53668 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Limk1P53668 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Limk1P53668 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms