Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdx1P52946 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdx1P52946 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.72■□□□□ 0.91
Pdx1P52946 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdx1P52946 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdx1P52946 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdx1P52946 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
Pdx1P52946 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdx1P52946 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdx1P52946 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdx1P52946 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdx1P52946 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdx1P52946 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdx1P52946 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.7■□□□□ 0.9
Pdx1P52946 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.7■□□□□ 0.9
Pdx1P52946 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.7■□□□□ 0.9
Pdx1P52946 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.7■□□□□ 0.9
Pdx1P52946 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.7■□□□□ 0.9
Pdx1P52946 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pdx1P52946 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.7■□□□□ 0.9
Pdx1P52946 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.69■□□□□ 0.9
Pdx1P52946 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdx1P52946 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdx1P52946 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdx1P52946 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pdx1P52946 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pdx1P52946 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdx1P52946 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
Pdx1P52946 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.68■□□□□ 0.9
Pdx1P52946 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.68■□□□□ 0.9
Pdx1P52946 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdx1P52946 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pdx1P52946 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.67■□□□□ 0.9
Pdx1P52946 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdx1P52946 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.66■□□□□ 0.9
Pdx1P52946 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.66■□□□□ 0.9
Pdx1P52946 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pdx1P52946 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdx1P52946 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.65■□□□□ 0.9
Pdx1P52946 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Pdx1P52946 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdx1P52946 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdx1P52946 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdx1P52946 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdx1P52946 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdx1P52946 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.64■□□□□ 0.89
Pdx1P52946 Gm10399-202ENSMUST00000202768 748 ntBASIC20.64■□□□□ 0.89
Pdx1P52946 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pdx1P52946 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdx1P52946 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdx1P52946 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdx1P52946 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdx1P52946 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.63■□□□□ 0.89
Pdx1P52946 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdx1P52946 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdx1P52946 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdx1P52946 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdx1P52946 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pdx1P52946 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pdx1P52946 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.62■□□□□ 0.89
Pdx1P52946 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdx1P52946 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdx1P52946 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdx1P52946 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pdx1P52946 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdx1P52946 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.61■□□□□ 0.89
Pdx1P52946 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdx1P52946 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pdx1P52946 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.61■□□□□ 0.89
Pdx1P52946 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms