Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga2P52927 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.83■□□□□ 0.44
Hmga2P52927 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga2P52927 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga2P52927 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga2P52927 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hmga2P52927 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.82■□□□□ 0.44
Hmga2P52927 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.82■□□□□ 0.44
Hmga2P52927 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.82■□□□□ 0.44
Hmga2P52927 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga2P52927 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.81■□□□□ 0.44
Hmga2P52927 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.81■□□□□ 0.44
Hmga2P52927 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga2P52927 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga2P52927 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga2P52927 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga2P52927 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hmga2P52927 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.8■□□□□ 0.44
Hmga2P52927 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Hmga2P52927 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga2P52927 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga2P52927 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmga2P52927 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.78■□□□□ 0.44
Hmga2P52927 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga2P52927 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga2P52927 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.77■□□□□ 0.44
Hmga2P52927 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.77■□□□□ 0.44
Hmga2P52927 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga2P52927 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Hmga2P52927 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga2P52927 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga2P52927 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga2P52927 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga2P52927 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmga2P52927 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
Hmga2P52927 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmga2P52927 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga2P52927 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hmga2P52927 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
Hmga2P52927 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Hmga2P52927 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmga2P52927 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hmga2P52927 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.75■□□□□ 0.43
Hmga2P52927 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga2P52927 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.74■□□□□ 0.43
Hmga2P52927 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga2P52927 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga2P52927 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga2P52927 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga2P52927 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hmga2P52927 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Hmga2P52927 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hmga2P52927 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmga2P52927 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmga2P52927 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmga2P52927 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga2P52927 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms