Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HmgclP38060 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HmgclP38060 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.7■□□□□ 0.9
HmgclP38060 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.7■□□□□ 0.9
HmgclP38060 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HmgclP38060 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HmgclP38060 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HmgclP38060 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.69■□□□□ 0.9
HmgclP38060 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HmgclP38060 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HmgclP38060 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HmgclP38060 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HmgclP38060 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HmgclP38060 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HmgclP38060 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HmgclP38060 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HmgclP38060 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HmgclP38060 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.67■□□□□ 0.9
HmgclP38060 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HmgclP38060 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HmgclP38060 Gm5812-201ENSMUST00000061073 957 ntBASIC20.67■□□□□ 0.9
HmgclP38060 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HmgclP38060 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HmgclP38060 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HmgclP38060 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HmgclP38060 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.66■□□□□ 0.9
HmgclP38060 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HmgclP38060 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HmgclP38060 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HmgclP38060 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HmgclP38060 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HmgclP38060 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HmgclP38060 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HmgclP38060 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HmgclP38060 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.64■□□□□ 0.89
HmgclP38060 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.64■□□□□ 0.89
HmgclP38060 Gm10399-202ENSMUST00000202768 748 ntBASIC20.64■□□□□ 0.89
HmgclP38060 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.64■□□□□ 0.89
HmgclP38060 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.64■□□□□ 0.89
HmgclP38060 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HmgclP38060 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HmgclP38060 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HmgclP38060 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HmgclP38060 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.63■□□□□ 0.89
HmgclP38060 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.63■□□□□ 0.89
HmgclP38060 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HmgclP38060 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
HmgclP38060 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HmgclP38060 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.62■□□□□ 0.89
HmgclP38060 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HmgclP38060 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
HmgclP38060 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HmgclP38060 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HmgclP38060 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HmgclP38060 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.61■□□□□ 0.89
HmgclP38060 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.61■□□□□ 0.89
HmgclP38060 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HmgclP38060 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.61■□□□□ 0.89
HmgclP38060 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HmgclP38060 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HmgclP38060 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.6■□□□□ 0.89
HmgclP38060 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HmgclP38060 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HmgclP38060 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HmgclP38060 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HmgclP38060 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms