Protein–RNA interactions for Protein: P35980

Rpl18, 60S ribosomal protein L18, mousemouse

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl18P35980 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rpl18P35980 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpl18P35980 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpl18P35980 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rpl18P35980 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.81■□□□□ 0.6
Rpl18P35980 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rpl18P35980 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Rpl18P35980 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl18P35980 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rpl18P35980 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.8■□□□□ 0.6
Rpl18P35980 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.8■□□□□ 0.6
Rpl18P35980 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpl18P35980 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl18P35980 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl18P35980 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl18P35980 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl18P35980 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl18P35980 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl18P35980 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl18P35980 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl18P35980 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpl18P35980 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpl18P35980 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpl18P35980 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rpl18P35980 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Rpl18P35980 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpl18P35980 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpl18P35980 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpl18P35980 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl18P35980 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl18P35980 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpl18P35980 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.76■□□□□ 0.59
Rpl18P35980 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.76■□□□□ 0.59
Rpl18P35980 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl18P35980 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpl18P35980 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpl18P35980 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Rpl18P35980 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.74■□□□□ 0.59
Rpl18P35980 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl18P35980 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpl18P35980 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.73■□□□□ 0.59
Rpl18P35980 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpl18P35980 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpl18P35980 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.73■□□□□ 0.59
Rpl18P35980 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpl18P35980 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.73■□□□□ 0.59
Rpl18P35980 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rpl18P35980 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.73■□□□□ 0.59
Rpl18P35980 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rpl18P35980 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpl18P35980 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rpl18P35980 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Rpl18P35980 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpl18P35980 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpl18P35980 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpl18P35980 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl18P35980 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rpl18P35980 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl18P35980 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rpl18P35980 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rpl18P35980 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.71■□□□□ 0.59
Rpl18P35980 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl18P35980 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rpl18P35980 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms