Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp13P33435 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Mmp13P33435 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp13P33435 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.32■■□□□ 1
Mmp13P33435 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp13P33435 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp13P33435 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp13P33435 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp13P33435 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.31■■□□□ 1
Mmp13P33435 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.31■■□□□ 1
Mmp13P33435 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.31■■□□□ 1
Mmp13P33435 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp13P33435 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp13P33435 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.31■■□□□ 1
Mmp13P33435 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.3■■□□□ 1
Mmp13P33435 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp13P33435 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Mmp13P33435 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp13P33435 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.3■■□□□ 1
Mmp13P33435 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp13P33435 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.3■■□□□ 1
Mmp13P33435 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp13P33435 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp13P33435 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mmp13P33435 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp13P33435 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp13P33435 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp13P33435 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.27■■□□□ 1
Mmp13P33435 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.27■■□□□ 1
Mmp13P33435 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.27■■□□□ 1
Mmp13P33435 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp13P33435 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp13P33435 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp13P33435 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.26■□□□□ 0.99
Mmp13P33435 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.26■□□□□ 0.99
Mmp13P33435 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp13P33435 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Mmp13P33435 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Mmp13P33435 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp13P33435 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp13P33435 Notumos-201ENSMUST00000151998 2659 ntBASIC21.26■□□□□ 0.99
Mmp13P33435 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mmp13P33435 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.25■□□□□ 0.99
Mmp13P33435 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp13P33435 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Mmp13P33435 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.24■□□□□ 0.99
Mmp13P33435 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp13P33435 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp13P33435 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp13P33435 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.23■□□□□ 0.99
Mmp13P33435 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp13P33435 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Mmp13P33435 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Mmp13P33435 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Mmp13P33435 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp13P33435 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp13P33435 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp13P33435 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Mmp13P33435 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp13P33435 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms