Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RxrbP28704 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.05■□□□□ 0.96
RxrbP28704 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RxrbP28704 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RxrbP28704 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RxrbP28704 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RxrbP28704 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RxrbP28704 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RxrbP28704 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.03■□□□□ 0.96
RxrbP28704 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.03■□□□□ 0.96
RxrbP28704 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.03■□□□□ 0.96
RxrbP28704 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RxrbP28704 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RxrbP28704 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RxrbP28704 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RxrbP28704 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RxrbP28704 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RxrbP28704 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RxrbP28704 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.02■□□□□ 0.96
RxrbP28704 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RxrbP28704 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RxrbP28704 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RxrbP28704 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RxrbP28704 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21■□□□□ 0.95
RxrbP28704 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RxrbP28704 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RxrbP28704 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RxrbP28704 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RxrbP28704 Gm9806-201ENSMUST00000051080 552 ntBASIC20.99■□□□□ 0.95
RxrbP28704 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.98■□□□□ 0.95
RxrbP28704 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RxrbP28704 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RxrbP28704 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RxrbP28704 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RxrbP28704 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RxrbP28704 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.98■□□□□ 0.95
RxrbP28704 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RxrbP28704 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RxrbP28704 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RxrbP28704 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RxrbP28704 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.97■□□□□ 0.95
RxrbP28704 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.97■□□□□ 0.95
RxrbP28704 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RxrbP28704 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RxrbP28704 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RxrbP28704 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Scarna2-201ENSMUST00000157560 414 ntBASIC20.96■□□□□ 0.95
RxrbP28704 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RxrbP28704 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RxrbP28704 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RxrbP28704 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RxrbP28704 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.95■□□□□ 0.94
RxrbP28704 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.95■□□□□ 0.94
RxrbP28704 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.95■□□□□ 0.94
RxrbP28704 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RxrbP28704 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RxrbP28704 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RxrbP28704 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RxrbP28704 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RxrbP28704 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RxrbP28704 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms