Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nckap1P28660 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nckap1P28660 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nckap1P28660 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.8■□□□□ 0.92
Nckap1P28660 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nckap1P28660 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Nckap1P28660 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.8■□□□□ 0.92
Nckap1P28660 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.79■□□□□ 0.92
Nckap1P28660 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nckap1P28660 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nckap1P28660 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nckap1P28660 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nckap1P28660 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Nckap1P28660 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nckap1P28660 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nckap1P28660 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nckap1P28660 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
Nckap1P28660 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nckap1P28660 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.78■□□□□ 0.92
Nckap1P28660 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nckap1P28660 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nckap1P28660 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nckap1P28660 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nckap1P28660 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nckap1P28660 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nckap1P28660 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Nckap1P28660 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nckap1P28660 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nckap1P28660 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.76■□□□□ 0.91
Nckap1P28660 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Nckap1P28660 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nckap1P28660 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nckap1P28660 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Nckap1P28660 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nckap1P28660 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Nckap1P28660 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nckap1P28660 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nckap1P28660 Gm9870-201ENSMUST00000063874 645 ntBASIC20.74■□□□□ 0.91
Nckap1P28660 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nckap1P28660 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nckap1P28660 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nckap1P28660 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.74■□□□□ 0.91
Nckap1P28660 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nckap1P28660 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nckap1P28660 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
Nckap1P28660 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Nckap1P28660 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nckap1P28660 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nckap1P28660 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nckap1P28660 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nckap1P28660 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nckap1P28660 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nckap1P28660 Gm27454-201ENSMUST00000185090 204 ntBASIC20.72■□□□□ 0.91
Nckap1P28660 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nckap1P28660 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nckap1P28660 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nckap1P28660 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
Nckap1P28660 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nckap1P28660 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nckap1P28660 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nckap1P28660 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nckap1P28660 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nckap1P28660 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nckap1P28660 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Nckap1P28660 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.7■□□□□ 0.91
Nckap1P28660 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nckap1P28660 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nckap1P28660 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nckap1P28660 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.7■□□□□ 0.9
Nckap1P28660 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nckap1P28660 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Nckap1P28660 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Nckap1P28660 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Nckap1P28660 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nckap1P28660 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nckap1P28660 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nckap1P28660 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.69■□□□□ 0.9
Nckap1P28660 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.69■□□□□ 0.9
Nckap1P28660 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.69■□□□□ 0.9
Nckap1P28660 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.69■□□□□ 0.9
Nckap1P28660 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nckap1P28660 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nckap1P28660 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms