Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tnfrsf1bP25119 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Gm9959-201ENSMUST00000068277 390 ntBASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.37■□□□□ 0.69
Tnfrsf1bP25119 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Etf1-202ENSMUST00000180351 108 ntBASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Rps24-207ENSMUST00000224568 714 ntBASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1bP25119 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Gm40881-201ENSMUST00000223397 166 ntBASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1bP25119 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1bP25119 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1bP25119 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tnfrsf1bP25119 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1bP25119 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1bP25119 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1bP25119 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf1bP25119 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Gm14117-201ENSMUST00000122417 843 ntBASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1bP25119 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Gm45102-201ENSMUST00000207427 857 ntBASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1bP25119 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 Gm7417-201ENSMUST00000192950 473 ntBASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1bP25119 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1bP25119 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1bP25119 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1bP25119 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms