Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BdnfP21237 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
BdnfP21237 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BdnfP21237 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.93■□□□□ 0.78
BdnfP21237 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BdnfP21237 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BdnfP21237 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BdnfP21237 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BdnfP21237 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BdnfP21237 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BdnfP21237 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.93■□□□□ 0.78
BdnfP21237 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BdnfP21237 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BdnfP21237 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BdnfP21237 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BdnfP21237 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BdnfP21237 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
BdnfP21237 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.92■□□□□ 0.78
BdnfP21237 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BdnfP21237 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BdnfP21237 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BdnfP21237 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BdnfP21237 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.9■□□□□ 0.78
BdnfP21237 Gm12366-201ENSMUST00000121722 873 ntBASIC19.9■□□□□ 0.78
BdnfP21237 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.9■□□□□ 0.78
BdnfP21237 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
BdnfP21237 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.9■□□□□ 0.78
BdnfP21237 Gm5786-201ENSMUST00000085368 882 ntBASIC19.9■□□□□ 0.78
BdnfP21237 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BdnfP21237 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
BdnfP21237 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BdnfP21237 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BdnfP21237 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
BdnfP21237 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.89■□□□□ 0.77
BdnfP21237 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
BdnfP21237 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BdnfP21237 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BdnfP21237 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BdnfP21237 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
BdnfP21237 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BdnfP21237 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BdnfP21237 Mir6538-201ENSMUST00000183713 110 ntBASIC19.87■□□□□ 0.77
BdnfP21237 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BdnfP21237 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
BdnfP21237 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BdnfP21237 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BdnfP21237 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BdnfP21237 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
BdnfP21237 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.86■□□□□ 0.77
BdnfP21237 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.86■□□□□ 0.77
BdnfP21237 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.86■□□□□ 0.77
BdnfP21237 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
BdnfP21237 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BdnfP21237 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BdnfP21237 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.85■□□□□ 0.77
BdnfP21237 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.85■□□□□ 0.77
BdnfP21237 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.85■□□□□ 0.77
BdnfP21237 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.85■□□□□ 0.77
BdnfP21237 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
BdnfP21237 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BdnfP21237 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BdnfP21237 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.84■□□□□ 0.77
BdnfP21237 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.84■□□□□ 0.77
BdnfP21237 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.84■□□□□ 0.77
BdnfP21237 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BdnfP21237 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms