Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdx1P18111 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdx1P18111 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdx1P18111 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdx1P18111 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdx1P18111 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdx1P18111 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdx1P18111 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cdx1P18111 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdx1P18111 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdx1P18111 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdx1P18111 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdx1P18111 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdx1P18111 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdx1P18111 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdx1P18111 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdx1P18111 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdx1P18111 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdx1P18111 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.62■□□□□ 0.25
Cdx1P18111 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.62■□□□□ 0.25
Cdx1P18111 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdx1P18111 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdx1P18111 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdx1P18111 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdx1P18111 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdx1P18111 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdx1P18111 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx1P18111 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx1P18111 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx1P18111 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx1P18111 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx1P18111 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cdx1P18111 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdx1P18111 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.59■□□□□ 0.25
Cdx1P18111 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdx1P18111 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.59■□□□□ 0.25
Cdx1P18111 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdx1P18111 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdx1P18111 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx1P18111 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.58■□□□□ 0.24
Cdx1P18111 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx1P18111 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx1P18111 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx1P18111 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.57■□□□□ 0.24
Cdx1P18111 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx1P18111 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.57■□□□□ 0.24
Cdx1P18111 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx1P18111 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx1P18111 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx1P18111 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx1P18111 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx1P18111 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms