Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Fn1P11276 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.55■□□□□ 0.24
Fn1P11276 Gm10653-202ENSMUST00000139570 835 ntBASIC16.55■□□□□ 0.24
Fn1P11276 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fn1P11276 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Fn1P11276 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fn1P11276 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fn1P11276 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Fn1P11276 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fn1P11276 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.54■□□□□ 0.24
Fn1P11276 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fn1P11276 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Fn1P11276 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fn1P11276 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Fn1P11276 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Fn1P11276 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Fn1P11276 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Fn1P11276 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Fn1P11276 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.52■□□□□ 0.24
Fn1P11276 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Fn1P11276 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Fn1P11276 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Fn1P11276 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.52■□□□□ 0.23
Fn1P11276 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Fn1P11276 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.52■□□□□ 0.23
Fn1P11276 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Fn1P11276 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Fn1P11276 Amer2-203ENSMUST00000225247 2662 ntBASIC16.52■□□□□ 0.23
Fn1P11276 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Fn1P11276 Gm7977-201ENSMUST00000193787 748 ntBASIC16.51■□□□□ 0.23
Fn1P11276 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Fn1P11276 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Fn1P11276 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.51■□□□□ 0.23
Fn1P11276 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.51■□□□□ 0.23
Fn1P11276 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Fn1P11276 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Fn1P11276 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Fn1P11276 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.5■□□□□ 0.23
Fn1P11276 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Fn1P11276 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Fn1P11276 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Fn1P11276 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Fn1P11276 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Fn1P11276 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Fn1P11276 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Fn1P11276 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Fn1P11276 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Fn1P11276 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.48■□□□□ 0.23
Fn1P11276 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Fn1P11276 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.47■□□□□ 0.23
Fn1P11276 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 Gm22240-201ENSMUST00000175225 82 ntBASIC16.47■□□□□ 0.23
Fn1P11276 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.47■□□□□ 0.23
Fn1P11276 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Fn1P11276 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.47■□□□□ 0.23
Fn1P11276 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Fn1P11276 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.46■□□□□ 0.23
Fn1P11276 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Fn1P11276 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Fn1P11276 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.46■□□□□ 0.23
Fn1P11276 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.46■□□□□ 0.23
Fn1P11276 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.46■□□□□ 0.23
Fn1P11276 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Fn1P11276 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fn1P11276 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Fn1P11276 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Fn1P11276 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fn1P11276 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fn1P11276 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.45■□□□□ 0.22
Fn1P11276 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.44■□□□□ 0.22
Fn1P11276 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.44■□□□□ 0.22
Fn1P11276 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Fn1P11276 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.44■□□□□ 0.22
Fn1P11276 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.44■□□□□ 0.22
Fn1P11276 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Fn1P11276 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fn1P11276 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fn1P11276 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fn1P11276 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fn1P11276 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fn1P11276 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 352.2 ms