Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smim1P0C8K7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smim1P0C8K7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smim1P0C8K7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim1P0C8K7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim1P0C8K7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smim1P0C8K7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim1P0C8K7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim1P0C8K7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim1P0C8K7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smim1P0C8K7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.45□□□□□ -0.1
Smim1P0C8K7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smim1P0C8K7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim1P0C8K7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.44□□□□□ -0.1
Smim1P0C8K7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim1P0C8K7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.43□□□□□ -0.1
Smim1P0C8K7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim1P0C8K7 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.42□□□□□ -0.1
Smim1P0C8K7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Smim1P0C8K7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim1P0C8K7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim1P0C8K7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.4□□□□□ -0.1
Smim1P0C8K7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smim1P0C8K7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smim1P0C8K7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim1P0C8K7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.37□□□□□ -0.11
Smim1P0C8K7 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.37□□□□□ -0.11
Smim1P0C8K7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.37□□□□□ -0.11
Smim1P0C8K7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smim1P0C8K7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.36□□□□□ -0.11
Smim1P0C8K7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms