Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.74■□□□□ 0.75
Krt1P04104 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt1P04104 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt1P04104 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt1P04104 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.74■□□□□ 0.75
Krt1P04104 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Krt1P04104 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Krt1P04104 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Krt1P04104 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.73■□□□□ 0.75
Krt1P04104 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Krt1P04104 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt1P04104 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Krt1P04104 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Krt1P04104 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Krt1P04104 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt1P04104 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Krt1P04104 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt1P04104 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt1P04104 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt1P04104 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.71■□□□□ 0.75
Krt1P04104 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt1P04104 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Krt1P04104 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Krt1P04104 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Gm4799-201ENSMUST00000095396 657 ntBASIC19.7■□□□□ 0.74
Krt1P04104 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Krt1P04104 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt1P04104 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt1P04104 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt1P04104 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt1P04104 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.69■□□□□ 0.74
Krt1P04104 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt1P04104 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Krt1P04104 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Krt1P04104 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt1P04104 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt1P04104 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.68■□□□□ 0.74
Krt1P04104 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.68■□□□□ 0.74
Krt1P04104 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.68■□□□□ 0.74
Krt1P04104 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Krt1P04104 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt1P04104 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Krt1P04104 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Krt1P04104 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.67■□□□□ 0.74
Krt1P04104 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.67■□□□□ 0.74
Krt1P04104 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt1P04104 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt1P04104 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt1P04104 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Krt1P04104 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Krt1P04104 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.66■□□□□ 0.74
Krt1P04104 Terc-201ENSMUST00000082862 423 ntBASIC19.66■□□□□ 0.74
Krt1P04104 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Krt1P04104 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt1P04104 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.66■□□□□ 0.74
Krt1P04104 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt1P04104 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt1P04104 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt1P04104 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt1P04104 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt1P04104 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt1P04104 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Krt1P04104 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.64■□□□□ 0.73
Krt1P04104 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt1P04104 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt1P04104 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Krt1P04104 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt1P04104 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Krt1P04104 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Krt1P04104 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.63■□□□□ 0.73
Krt1P04104 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt1P04104 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
Krt1P04104 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt1P04104 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt1P04104 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Krt1P04104 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt1P04104 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms