Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IghmP01872 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IghmP01872 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IghmP01872 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IghmP01872 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IghmP01872 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IghmP01872 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IghmP01872 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.65■□□□□ 0.74
IghmP01872 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.64■□□□□ 0.73
IghmP01872 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.64■□□□□ 0.73
IghmP01872 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IghmP01872 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IghmP01872 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.64■□□□□ 0.73
IghmP01872 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IghmP01872 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IghmP01872 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
IghmP01872 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.63■□□□□ 0.73
IghmP01872 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.63■□□□□ 0.73
IghmP01872 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.63■□□□□ 0.73
IghmP01872 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.63■□□□□ 0.73
IghmP01872 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.63■□□□□ 0.73
IghmP01872 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IghmP01872 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IghmP01872 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.62■□□□□ 0.73
IghmP01872 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
IghmP01872 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IghmP01872 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.61■□□□□ 0.73
IghmP01872 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
IghmP01872 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IghmP01872 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IghmP01872 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IghmP01872 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IghmP01872 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.6■□□□□ 0.73
IghmP01872 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.6■□□□□ 0.73
IghmP01872 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IghmP01872 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.59■□□□□ 0.73
IghmP01872 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IghmP01872 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IghmP01872 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
IghmP01872 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
IghmP01872 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.58■□□□□ 0.73
IghmP01872 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
IghmP01872 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IghmP01872 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IghmP01872 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
IghmP01872 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
IghmP01872 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IghmP01872 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IghmP01872 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.57■□□□□ 0.72
IghmP01872 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IghmP01872 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.57■□□□□ 0.72
IghmP01872 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.56■□□□□ 0.72
IghmP01872 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
IghmP01872 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IghmP01872 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IghmP01872 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IghmP01872 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.55■□□□□ 0.72
IghmP01872 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IghmP01872 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms