Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
P01852 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01852 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.08■□□□□ 0.64
P01852 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.08■□□□□ 0.64
P01852 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.08■□□□□ 0.64
P01852 Rps24-207ENSMUST00000224568 714 ntBASIC19.08■□□□□ 0.64
P01852 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01852 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01852 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.07■□□□□ 0.64
P01852 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.07■□□□□ 0.64
P01852 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01852 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
P01852 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P01852 Gm10399-202ENSMUST00000202768 748 ntBASIC19.06■□□□□ 0.64
P01852 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
P01852 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01852 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01852 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
P01852 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01852 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.05■□□□□ 0.64
P01852 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
P01852 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01852 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.05■□□□□ 0.64
P01852 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
P01852 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
P01852 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.04■□□□□ 0.64
P01852 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.04■□□□□ 0.64
P01852 Gm45102-201ENSMUST00000207427 857 ntBASIC19.04■□□□□ 0.64
P01852 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.04■□□□□ 0.64
P01852 Gm9959-201ENSMUST00000068277 390 ntBASIC19.04■□□□□ 0.64
P01852 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01852 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
P01852 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.03■□□□□ 0.64
P01852 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01852 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01852 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01852 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01852 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01852 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.02■□□□□ 0.64
P01852 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01852 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01852 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01852 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01852 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
P01852 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
P01852 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.01■□□□□ 0.63
P01852 Gm40881-201ENSMUST00000223397 166 ntBASIC19.01■□□□□ 0.63
P01852 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01852 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
P01852 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01852 Etf1-202ENSMUST00000180351 108 ntBASIC19■□□□□ 0.63
P01852 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19■□□□□ 0.63
P01852 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01852 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
P01852 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
P01852 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
P01852 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01852 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.99■□□□□ 0.63
P01852 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
P01852 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.99■□□□□ 0.63
P01852 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.99■□□□□ 0.63
P01852 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01852 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P01852 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
P01852 Gm14117-201ENSMUST00000122417 843 ntBASIC18.98■□□□□ 0.63
P01852 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01852 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.98■□□□□ 0.63
P01852 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.98■□□□□ 0.63
P01852 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.98■□□□□ 0.63
P01852 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms