Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TcraP01849 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TcraP01849 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.14■□□□□ 0.01
TcraP01849 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TcraP01849 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TcraP01849 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TcraP01849 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TcraP01849 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 Gm7432-201ENSMUST00000210343 879 ntBASIC15.13■□□□□ 0.01
TcraP01849 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.13■□□□□ 0.01
TcraP01849 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TcraP01849 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TcraP01849 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.12■□□□□ 0.01
TcraP01849 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.12■□□□□ 0.01
TcraP01849 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TcraP01849 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TcraP01849 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.11■□□□□ 0.01
TcraP01849 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.11■□□□□ 0.01
TcraP01849 Gm4799-201ENSMUST00000095396 657 ntBASIC15.11■□□□□ 0.01
TcraP01849 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.11■□□□□ 0.01
TcraP01849 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TcraP01849 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.1■□□□□ 0.01
TcraP01849 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.1■□□□□ 0.01
TcraP01849 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.1■□□□□ 0.01
TcraP01849 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TcraP01849 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TcraP01849 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TcraP01849 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TcraP01849 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.09■□□□□ 0.01
TcraP01849 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.09■□□□□ 0.01
TcraP01849 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TcraP01849 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TcraP01849 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.09■□□□□ 0.01
TcraP01849 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TcraP01849 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TcraP01849 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TcraP01849 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TcraP01849 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TcraP01849 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TcraP01849 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TcraP01849 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.08■□□□□ 0
TcraP01849 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms