Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.15■□□□□ 0.5
Igh-VJ558P01758 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.14■□□□□ 0.5
Igh-VJ558P01758 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.13■□□□□ 0.49
Igh-VJ558P01758 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms