Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Igh-VJ558P01758 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igh-VJ558P01758 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Igh-VJ558P01758 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igh-VJ558P01758 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.15■□□□□ 0.5
Igh-VJ558P01758 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.14■□□□□ 0.5
Igh-VJ558P01758 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igh-VJ558P01758 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.13■□□□□ 0.49
Igh-VJ558P01758 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igh-VJ558P01758 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igh-VJ558P01758 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igh-VJ558P01758 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igh-VJ558P01758 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms