Protein–RNA interactions for Protein: P01740

T-cell receptor gamma chain V region V108A, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01740 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01740 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01740 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.69■□□□□ 0.9
P01740 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
P01740 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P01740 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01740 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.68■□□□□ 0.9
P01740 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01740 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01740 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01740 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01740 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01740 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01740 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01740 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01740 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01740 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.67■□□□□ 0.9
P01740 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.67■□□□□ 0.9
P01740 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01740 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
P01740 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01740 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01740 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.66■□□□□ 0.9
P01740 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01740 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01740 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
P01740 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P01740 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P01740 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P01740 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P01740 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.64■□□□□ 0.89
P01740 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.64■□□□□ 0.89
P01740 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01740 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
P01740 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01740 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
P01740 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
P01740 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.63■□□□□ 0.89
P01740 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01740 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P01740 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
P01740 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01740 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
P01740 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01740 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01740 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01740 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.61■□□□□ 0.89
P01740 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
P01740 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
P01740 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01740 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
P01740 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.6■□□□□ 0.89
P01740 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.6■□□□□ 0.89
P01740 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.6■□□□□ 0.89
P01740 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.6■□□□□ 0.89
P01740 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
P01740 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.6■□□□□ 0.89
P01740 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
P01740 Cap2-205ENSMUST00000225824 1634 ntBASIC20.6■□□□□ 0.89
P01740 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01740 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P01740 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01740 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01740 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01740 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01740 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.59■□□□□ 0.89
P01740 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.58■□□□□ 0.89
P01740 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
P01740 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P01740 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01740 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01740 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01740 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms