Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ifna1P01572 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ifna1P01572 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.57■□□□□ 0.4
Ifna1P01572 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ifna1P01572 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ifna1P01572 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ifna1P01572 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ifna1P01572 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.56■□□□□ 0.4
Ifna1P01572 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
Ifna1P01572 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.56■□□□□ 0.4
Ifna1P01572 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ifna1P01572 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ifna1P01572 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ifna1P01572 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.55■□□□□ 0.4
Ifna1P01572 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ifna1P01572 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ifna1P01572 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ifna1P01572 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ifna1P01572 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.53■□□□□ 0.4
Ifna1P01572 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ifna1P01572 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ifna1P01572 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ifna1P01572 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ifna1P01572 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ifna1P01572 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ifna1P01572 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Ifna1P01572 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.51■□□□□ 0.39
Ifna1P01572 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ifna1P01572 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ifna1P01572 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ifna1P01572 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.51■□□□□ 0.39
Ifna1P01572 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ifna1P01572 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ifna1P01572 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ifna1P01572 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ifna1P01572 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ifna1P01572 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ifna1P01572 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.5■□□□□ 0.39
Ifna1P01572 Scarna2-201ENSMUST00000157560 414 ntBASIC17.5■□□□□ 0.39
Ifna1P01572 Gm16437-201ENSMUST00000025669 507 ntBASIC17.5■□□□□ 0.39
Ifna1P01572 Gm9806-201ENSMUST00000051080 552 ntBASIC17.5■□□□□ 0.39
Ifna1P01572 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ifna1P01572 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ifna1P01572 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ifna1P01572 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ifna1P01572 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ifna1P01572 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ifna1P01572 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ifna1P01572 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ifna1P01572 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ifna1P01572 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ifna1P01572 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.48■□□□□ 0.39
Ifna1P01572 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.48■□□□□ 0.39
Ifna1P01572 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ifna1P01572 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ifna1P01572 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ifna1P01572 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ifna1P01572 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.47■□□□□ 0.39
Ifna1P01572 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms