Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sh2d1aO88890 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh2d1aO88890 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sh2d1aO88890 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.7□□□□□ -0.06
Sh2d1aO88890 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh2d1aO88890 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.69□□□□□ -0.06
Sh2d1aO88890 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh2d1aO88890 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh2d1aO88890 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Sh2d1aO88890 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh2d1aO88890 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.65□□□□□ -0.06
Sh2d1aO88890 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sh2d1aO88890 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh2d1aO88890 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh2d1aO88890 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh2d1aO88890 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.61□□□□□ -0.07
Sh2d1aO88890 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.61□□□□□ -0.07
Sh2d1aO88890 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh2d1aO88890 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms