Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CcnkO88874 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.38■□□□□ 0.53
CcnkO88874 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.38■□□□□ 0.53
CcnkO88874 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CcnkO88874 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CcnkO88874 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CcnkO88874 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
CcnkO88874 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CcnkO88874 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnkO88874 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.36■□□□□ 0.53
CcnkO88874 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.36■□□□□ 0.53
CcnkO88874 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CcnkO88874 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnkO88874 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Gm14523-201ENSMUST00000117260 558 ntBASIC18.35■□□□□ 0.53
CcnkO88874 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.35■□□□□ 0.53
CcnkO88874 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnkO88874 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CcnkO88874 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnkO88874 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnkO88874 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnkO88874 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CcnkO88874 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.34■□□□□ 0.53
CcnkO88874 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnkO88874 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnkO88874 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CcnkO88874 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CcnkO88874 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CcnkO88874 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CcnkO88874 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CcnkO88874 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnkO88874 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnkO88874 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnkO88874 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CcnkO88874 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CcnkO88874 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.32■□□□□ 0.52
CcnkO88874 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CcnkO88874 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CcnkO88874 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CcnkO88874 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CcnkO88874 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CcnkO88874 Gm27502-201ENSMUST00000183495 199 ntBASIC18.31■□□□□ 0.52
CcnkO88874 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.31■□□□□ 0.52
CcnkO88874 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnkO88874 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CcnkO88874 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnkO88874 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnkO88874 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnkO88874 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnkO88874 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.3■□□□□ 0.52
CcnkO88874 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.3■□□□□ 0.52
CcnkO88874 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnkO88874 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.3■□□□□ 0.52
CcnkO88874 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.3■□□□□ 0.52
CcnkO88874 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.29■□□□□ 0.52
CcnkO88874 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CcnkO88874 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.29■□□□□ 0.52
CcnkO88874 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CcnkO88874 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnkO88874 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.28■□□□□ 0.52
CcnkO88874 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnkO88874 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.28■□□□□ 0.52
CcnkO88874 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
CcnkO88874 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnkO88874 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnkO88874 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms