Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.89■□□□□ 0.93
Cacna1hO88427 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.88■□□□□ 0.93
Cacna1hO88427 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1hO88427 Mir7071-201ENSMUST00000184847 69 ntBASIC20.88■□□□□ 0.93
Cacna1hO88427 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.88■□□□□ 0.93
Cacna1hO88427 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.87■□□□□ 0.93
Cacna1hO88427 Gm18671-201ENSMUST00000214826 683 ntBASIC20.87■□□□□ 0.93
Cacna1hO88427 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1hO88427 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cacna1hO88427 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1hO88427 Gm40848-201ENSMUST00000221998 324 ntBASIC20.87■□□□□ 0.93
Cacna1hO88427 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cacna1hO88427 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1hO88427 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.86■□□□□ 0.93
Cacna1hO88427 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cacna1hO88427 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1hO88427 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1hO88427 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1hO88427 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1hO88427 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1hO88427 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1hO88427 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1hO88427 Gm10252-201ENSMUST00000209541 832 ntBASIC20.85■□□□□ 0.93
Cacna1hO88427 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1hO88427 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.84■□□□□ 0.93
Cacna1hO88427 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1hO88427 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1hO88427 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cacna1hO88427 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1hO88427 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1hO88427 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1hO88427 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Cacna1hO88427 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.83■□□□□ 0.93
Cacna1hO88427 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1hO88427 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1hO88427 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cacna1hO88427 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1hO88427 Gm22240-201ENSMUST00000175225 82 ntBASIC20.82■□□□□ 0.92
Cacna1hO88427 Gm7977-201ENSMUST00000193787 748 ntBASIC20.82■□□□□ 0.92
Cacna1hO88427 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1hO88427 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1hO88427 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1hO88427 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Cacna1hO88427 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1hO88427 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.81■□□□□ 0.92
Cacna1hO88427 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1hO88427 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1hO88427 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.81■□□□□ 0.92
Cacna1hO88427 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.81■□□□□ 0.92
Cacna1hO88427 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.8■□□□□ 0.92
Cacna1hO88427 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1hO88427 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1hO88427 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1hO88427 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1hO88427 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.8■□□□□ 0.92
Cacna1hO88427 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1hO88427 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1hO88427 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1hO88427 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.78■□□□□ 0.92
Cacna1hO88427 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cacna1hO88427 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1hO88427 Gm27801-201ENSMUST00000184174 223 ntBASIC20.78■□□□□ 0.92
Cacna1hO88427 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.78■□□□□ 0.92
Cacna1hO88427 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cacna1hO88427 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cacna1hO88427 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.77■□□□□ 0.92
Cacna1hO88427 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1hO88427 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Cacna1hO88427 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1hO88427 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cacna1hO88427 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1hO88427 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1hO88427 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1hO88427 Smad6-203ENSMUST00000179458 273 ntBASIC20.75■□□□□ 0.91
Cacna1hO88427 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1hO88427 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Cacna1hO88427 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.75■□□□□ 0.91
Cacna1hO88427 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1hO88427 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1hO88427 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1hO88427 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1hO88427 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1hO88427 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1hO88427 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
Cacna1hO88427 Gm10653-202ENSMUST00000139570 835 ntBASIC20.74■□□□□ 0.91
Cacna1hO88427 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacna1hO88427 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.73■□□□□ 0.91
Cacna1hO88427 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1hO88427 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1hO88427 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.73■□□□□ 0.91
Cacna1hO88427 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.73■□□□□ 0.91
Cacna1hO88427 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.73■□□□□ 0.91
Cacna1hO88427 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1hO88427 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1hO88427 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms