Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tulp3O88413 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.46■□□□□ 0.71
Tulp3O88413 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Tulp3O88413 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tulp3O88413 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.46■□□□□ 0.71
Tulp3O88413 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.46■□□□□ 0.71
Tulp3O88413 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tulp3O88413 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Gm9806-201ENSMUST00000051080 552 ntBASIC19.45■□□□□ 0.7
Tulp3O88413 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tulp3O88413 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tulp3O88413 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tulp3O88413 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Tulp3O88413 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.44■□□□□ 0.7
Tulp3O88413 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tulp3O88413 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.44■□□□□ 0.7
Tulp3O88413 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Tulp3O88413 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tulp3O88413 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tulp3O88413 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tulp3O88413 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tulp3O88413 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tulp3O88413 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tulp3O88413 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
Tulp3O88413 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.43■□□□□ 0.7
Tulp3O88413 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tulp3O88413 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.43■□□□□ 0.7
Tulp3O88413 Scarna2-201ENSMUST00000157560 414 ntBASIC19.43■□□□□ 0.7
Tulp3O88413 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.42■□□□□ 0.7
Tulp3O88413 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tulp3O88413 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.42■□□□□ 0.7
Tulp3O88413 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tulp3O88413 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tulp3O88413 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tulp3O88413 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tulp3O88413 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.41■□□□□ 0.7
Tulp3O88413 Gm16437-201ENSMUST00000025669 507 ntBASIC19.41■□□□□ 0.7
Tulp3O88413 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.41■□□□□ 0.7
Tulp3O88413 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tulp3O88413 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tulp3O88413 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tulp3O88413 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tulp3O88413 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tulp3O88413 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
Tulp3O88413 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tulp3O88413 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tulp3O88413 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tulp3O88413 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tulp3O88413 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tulp3O88413 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tulp3O88413 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.38■□□□□ 0.69
Tulp3O88413 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.38■□□□□ 0.69
Tulp3O88413 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tulp3O88413 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tulp3O88413 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Tulp3O88413 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tulp3O88413 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tulp3O88413 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tulp3O88413 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tulp3O88413 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.36■□□□□ 0.69
Tulp3O88413 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.36■□□□□ 0.69
Tulp3O88413 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tulp3O88413 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tulp3O88413 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tulp3O88413 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tulp3O88413 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.35■□□□□ 0.69
Tulp3O88413 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms