Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim3O70209 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pdlim3O70209 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim3O70209 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim3O70209 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.92■□□□□ 0.62
Pdlim3O70209 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.92■□□□□ 0.62
Pdlim3O70209 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim3O70209 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pdlim3O70209 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pdlim3O70209 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.92■□□□□ 0.62
Pdlim3O70209 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim3O70209 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pdlim3O70209 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pdlim3O70209 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim3O70209 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdlim3O70209 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim3O70209 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdlim3O70209 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim3O70209 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim3O70209 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim3O70209 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.9■□□□□ 0.62
Pdlim3O70209 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdlim3O70209 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdlim3O70209 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pdlim3O70209 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.89■□□□□ 0.61
Pdlim3O70209 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim3O70209 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim3O70209 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim3O70209 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.88■□□□□ 0.61
Pdlim3O70209 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdlim3O70209 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim3O70209 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim3O70209 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Gm11687-201ENSMUST00000118911 886 ntBASIC18.87■□□□□ 0.61
Pdlim3O70209 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.87■□□□□ 0.61
Pdlim3O70209 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim3O70209 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Pdlim3O70209 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim3O70209 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim3O70209 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.86■□□□□ 0.61
Pdlim3O70209 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim3O70209 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim3O70209 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim3O70209 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim3O70209 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim3O70209 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pdlim3O70209 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim3O70209 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pdlim3O70209 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.83■□□□□ 0.61
Pdlim3O70209 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.83■□□□□ 0.61
Pdlim3O70209 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim3O70209 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim3O70209 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.83■□□□□ 0.6
Pdlim3O70209 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim3O70209 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim3O70209 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim3O70209 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim3O70209 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pdlim3O70209 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pdlim3O70209 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim3O70209 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
Pdlim3O70209 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim3O70209 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms