Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb2O55203 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ldb2O55203 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb2O55203 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ldb2O55203 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.86■□□□□ 0.93
Ldb2O55203 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ldb2O55203 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb2O55203 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb2O55203 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb2O55203 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.85■□□□□ 0.93
Ldb2O55203 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.85■□□□□ 0.93
Ldb2O55203 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.85■□□□□ 0.93
Ldb2O55203 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ldb2O55203 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.85■□□□□ 0.93
Ldb2O55203 Gm10232-201ENSMUST00000089221 720 ntBASIC20.85■□□□□ 0.93
Ldb2O55203 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb2O55203 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb2O55203 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb2O55203 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb2O55203 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb2O55203 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ldb2O55203 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb2O55203 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb2O55203 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.84■□□□□ 0.93
Ldb2O55203 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb2O55203 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb2O55203 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.83■□□□□ 0.93
Ldb2O55203 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ldb2O55203 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ldb2O55203 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ldb2O55203 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.82■□□□□ 0.92
Ldb2O55203 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb2O55203 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Ldb2O55203 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb2O55203 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ldb2O55203 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb2O55203 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ldb2O55203 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ldb2O55203 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ldb2O55203 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ldb2O55203 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb2O55203 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb2O55203 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb2O55203 Gm5812-201ENSMUST00000061073 957 ntBASIC20.79■□□□□ 0.92
Ldb2O55203 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ldb2O55203 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.78■□□□□ 0.92
Ldb2O55203 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ldb2O55203 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ldb2O55203 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.78■□□□□ 0.92
Ldb2O55203 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.78■□□□□ 0.92
Ldb2O55203 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ldb2O55203 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.77■□□□□ 0.92
Ldb2O55203 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Ldb2O55203 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb2O55203 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb2O55203 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ldb2O55203 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.77■□□□□ 0.91
Ldb2O55203 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb2O55203 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ldb2O55203 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb2O55203 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Ldb2O55203 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.76■□□□□ 0.91
Ldb2O55203 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb2O55203 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb2O55203 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.76■□□□□ 0.91
Ldb2O55203 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ldb2O55203 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.75■□□□□ 0.91
Ldb2O55203 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb2O55203 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb2O55203 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.75■□□□□ 0.91
Ldb2O55203 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb2O55203 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ldb2O55203 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms