Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm12251-201ENSMUST00000117893 792 ntBASIC20.35■□□□□ 0.85
Cacna1bO55017 Gm7291-201ENSMUST00000199147 382 ntBASIC20.35■□□□□ 0.85
Cacna1bO55017 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.34■□□□□ 0.85
Cacna1bO55017 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1bO55017 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.34■□□□□ 0.85
Cacna1bO55017 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1bO55017 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cacna1bO55017 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacna1bO55017 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1bO55017 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cacna1bO55017 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1bO55017 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cacna1bO55017 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacna1bO55017 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.32■□□□□ 0.84
Cacna1bO55017 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1bO55017 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1bO55017 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.31■□□□□ 0.84
Cacna1bO55017 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1bO55017 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cacna1bO55017 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1bO55017 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.31■□□□□ 0.84
Cacna1bO55017 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cacna1bO55017 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1bO55017 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.3■□□□□ 0.84
Cacna1bO55017 Gm9870-201ENSMUST00000063874 645 ntBASIC20.3■□□□□ 0.84
Cacna1bO55017 Gm10493-201ENSMUST00000097270 612 ntBASIC20.3■□□□□ 0.84
Cacna1bO55017 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.3■□□□□ 0.84
Cacna1bO55017 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.3■□□□□ 0.84
Cacna1bO55017 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cacna1bO55017 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Cacna1bO55017 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1bO55017 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1bO55017 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1bO55017 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1bO55017 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1bO55017 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.29■□□□□ 0.84
Cacna1bO55017 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
Cacna1bO55017 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1bO55017 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cacna1bO55017 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cacna1bO55017 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cacna1bO55017 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cacna1bO55017 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cacna1bO55017 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cacna1bO55017 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.27■□□□□ 0.84
Cacna1bO55017 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.27■□□□□ 0.84
Cacna1bO55017 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1bO55017 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1bO55017 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1bO55017 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1bO55017 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cacna1bO55017 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1bO55017 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1bO55017 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cacna1bO55017 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1bO55017 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1bO55017 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1bO55017 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1bO55017 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.25■□□□□ 0.83
Cacna1bO55017 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cacna1bO55017 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1bO55017 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1bO55017 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1bO55017 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1bO55017 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacna1bO55017 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1bO55017 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1bO55017 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.24■□□□□ 0.83
Cacna1bO55017 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.23■□□□□ 0.83
Cacna1bO55017 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1bO55017 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1bO55017 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1bO55017 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1bO55017 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cacna1bO55017 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cacna1bO55017 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.22■□□□□ 0.83
Cacna1bO55017 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1bO55017 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms