Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf13O54965 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.91■□□□□ 0.62
Rnf13O54965 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf13O54965 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf13O54965 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf13O54965 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf13O54965 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rnf13O54965 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf13O54965 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf13O54965 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf13O54965 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf13O54965 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf13O54965 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Rnf13O54965 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf13O54965 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf13O54965 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf13O54965 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf13O54965 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf13O54965 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf13O54965 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rnf13O54965 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf13O54965 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf13O54965 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf13O54965 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Rnf13O54965 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf13O54965 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf13O54965 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf13O54965 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf13O54965 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf13O54965 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.84■□□□□ 0.61
Rnf13O54965 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf13O54965 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf13O54965 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf13O54965 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf13O54965 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf13O54965 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf13O54965 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf13O54965 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf13O54965 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf13O54965 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.83■□□□□ 0.6
Rnf13O54965 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.83■□□□□ 0.6
Rnf13O54965 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf13O54965 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf13O54965 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf13O54965 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf13O54965 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf13O54965 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf13O54965 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf13O54965 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf13O54965 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.81■□□□□ 0.6
Rnf13O54965 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf13O54965 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf13O54965 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf13O54965 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf13O54965 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rnf13O54965 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf13O54965 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf13O54965 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf13O54965 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf13O54965 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf13O54965 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf13O54965 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf13O54965 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf13O54965 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms