Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccr6O54689 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr6O54689 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr6O54689 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr6O54689 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr6O54689 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.58■□□□□ 0.4
Ccr6O54689 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr6O54689 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr6O54689 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccr6O54689 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.58■□□□□ 0.4
Ccr6O54689 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr6O54689 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr6O54689 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr6O54689 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr6O54689 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr6O54689 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.57■□□□□ 0.4
Ccr6O54689 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr6O54689 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccr6O54689 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Ccr6O54689 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccr6O54689 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccr6O54689 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccr6O54689 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccr6O54689 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Ccr6O54689 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr6O54689 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr6O54689 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Mir3960-201ENSMUST00000198213 73 ntBASIC17.55■□□□□ 0.4
Ccr6O54689 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr6O54689 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.55■□□□□ 0.4
Ccr6O54689 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr6O54689 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr6O54689 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccr6O54689 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccr6O54689 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccr6O54689 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.54■□□□□ 0.4
Ccr6O54689 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr6O54689 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccr6O54689 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ccr6O54689 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccr6O54689 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccr6O54689 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ccr6O54689 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr6O54689 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccr6O54689 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr6O54689 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.52■□□□□ 0.4
Ccr6O54689 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr6O54689 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr6O54689 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr6O54689 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr6O54689 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ccr6O54689 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccr6O54689 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr6O54689 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr6O54689 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccr6O54689 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccr6O54689 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr6O54689 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr6O54689 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccr6O54689 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr6O54689 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccr6O54689 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccr6O54689 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccr6O54689 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Ccr6O54689 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms