Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nr1i3O35627 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
Nr1i3O35627 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nr1i3O35627 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.52■■□□□ 1.2
Nr1i3O35627 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nr1i3O35627 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.52■■□□□ 1.2
Nr1i3O35627 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nr1i3O35627 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Nr1i3O35627 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.52■■□□□ 1.2
Nr1i3O35627 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Nr1i3O35627 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
Nr1i3O35627 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.51■■□□□ 1.19
Nr1i3O35627 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.51■■□□□ 1.19
Nr1i3O35627 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nr1i3O35627 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Nr1i3O35627 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nr1i3O35627 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nr1i3O35627 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nr1i3O35627 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nr1i3O35627 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.49■■□□□ 1.19
Nr1i3O35627 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.49■■□□□ 1.19
Nr1i3O35627 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nr1i3O35627 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.48■■□□□ 1.19
Nr1i3O35627 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.48■■□□□ 1.19
Nr1i3O35627 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nr1i3O35627 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nr1i3O35627 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.47■■□□□ 1.19
Nr1i3O35627 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nr1i3O35627 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nr1i3O35627 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nr1i3O35627 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nr1i3O35627 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nr1i3O35627 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Nr1i3O35627 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nr1i3O35627 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.44■■□□□ 1.18
Nr1i3O35627 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nr1i3O35627 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.44■■□□□ 1.18
Nr1i3O35627 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nr1i3O35627 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nr1i3O35627 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nr1i3O35627 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nr1i3O35627 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Nr1i3O35627 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Nr1i3O35627 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Nr1i3O35627 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Nr1i3O35627 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Nr1i3O35627 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Nr1i3O35627 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Nr1i3O35627 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nr1i3O35627 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Nr1i3O35627 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Nr1i3O35627 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Nr1i3O35627 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nr1i3O35627 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms